Genomics

Reference Indexes for krepp

krepp is an alignment-free method for estimating distances and phylogenetic placement of individual reads to many thousands of reference genomes in a scalable manner using k-mers. This dataset includes k-mer-based indexes consisting of ultra-large reference genome sets that can be efficiently analyzed using krepp.

Listed for discovery. Access is provided by the original publisher under its terms.

Data coverage

Access & permitted use

Review the publisher’s documentation for availability, eligibility and permitted uses, including commercial analysis, model training and redistribution.

GPL-3.0 license. Use of the data should be cited in the usual way, following https://github.com/bo1929/krepp/tree/master?tab=readme-ov-filecitation.

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