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Genomics

NCBI SRA Gene Feature RNA-Seq counts

The NIH Sequence Read Archive (SRA), hosted by the [National Center for Biotechnology Information (NCBI) at the National Library of Medicine (NLM) stores sequencing data and alignment information from high-throughput next-generation sequencing platforms. SRA has conducted gene expression analysis of publicly released human and mouse RNA-Seq experiments to process raw RNA-seq reads into concise formats that summarize the expression results. The un-normalized feature counts for each SRA record are available in tab-delimited (.tsv) format. The tsv files include two columns, the gene id and count. These counts facilitate...

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Data coverage

The NIH Sequence Read Archive (SRA), hosted by the [National Center for Biotechnology Information (NCBI) at the National Library of Medicine (NLM) stores sequencing data and alignment information from high-throughput next-generation sequencing platforms. SRA has conducted gene expression analysis of publicly released human and mouse RNA-Seq experiments to process raw RNA-seq reads into concise formats that summarize the expression results. The un-normalized feature counts for each SRA record are available in tab-delimited (.tsv) format. The tsv files include two columns, the gene id and count. These counts facilitate differential gene expression analyses, particularly across studies and the entirety of the SRA corpus.

Access & permitted use

Review the publisher’s documentation for availability, eligibility and permitted uses, including commercial analysis, model training and redistribution.

NCBI Policy and NIH Genomic Data Sharing Policy

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